| Common name: | MMP11,RAT2 |
| Defline: | Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) |
| Description: | belongs to the large VMP-family of metalloproteinases (identified in Volvox); the binding site of the catalytic metal ion in VMPs is QExxHxxGxxH not HExxHxxGxxH, therefore VMPs prefer copper for activity rather than zinc; extracellular matrix glycoproteins (cell wall glycoproteins) with a hydroxyproline-rich (HR) domain [PMID: 12034745] |
| Synonyms: | g9534.t1,RAT2,MMP11 |
| Chromosome: | chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5) |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013538_1 | CLIP2.013538 | CDS | 80 | 6.1 |
| CLIP2.013538_2 | CLIP2.013538 | CDS | 80 | 6.1 |
| CLIP2.016402_1 | CLIP2.016402 | intron | 80 | 6.1 |
| CLIP2.016402_2 | CLIP2.016402 | intron | 80 | 6.1 |
| CLIP2.030714_1 | CLIP2.030714 | CDS | 80 | 6.1 |
| CLIP2.030714_2 | CLIP2.030714 | CDS | 80 | 6.1 |
| CLIP2.034230_1 | CLIP2.034230 | CDS | 80 | 6.1 |
| CLIP2.034230_2 | CLIP2.034230 | CDS | 80 | 6.1 |
| CLIP2.036109_1 | CLIP2.036109 | CDS | 80 | 6.1 |
| CLIP2.036248_1 | CLIP2.036248 | intron | 80 | 6.1 |
| LMJ.RY0402.063972_1 | LMJ.RY0402.063972 | intron | 73 | 5.5 |
| LMJ.RY0402.205036_1 | LMJ.RY0402.205036 | CDS | 95 | 5.5 |
| LMJ.RY0402.205036_2 | LMJ.RY0402.205036 | CDS | 95 | 5.5 |
| LMJ.RY0402.221422_1 | LMJ.RY0402.221422 | intron | 95 | 5.5 |
| LMJ.RY0402.221422_2 | LMJ.RY0402.221422 | intron | 95 | 5.5 |
| PFAM: | PF05548 |
| PANTHER: | |
| KEGG_ec: | EC:2.7.11.1 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.