Insertion junction: CLIP2.030714_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030714
Chromosome:chromosome 2
Location:6420950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388350 MMP11,RAT2 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGCCCCTACGGAGGCGGCTATGGAGCCTAGGCTGTGTGACCCCTTC
Internal bar code:TATAAAGGGCAAACTCAACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGCTATGTGGTGAAGC
Suggested primer 2:TACCGGTAGCATCTGACCCA