Insertion junction: CLIP2.013579_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013579
Chromosome:chromosome 11
Location:1662714
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g468356 TPR7,TPR (1 of 1) K09291 - nucleoprotein TPR (TPR, MLP1, MLP2); Tetratricopeptide-repeat protein 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGAGAAGTGTAGCGAAGTAGACAGGGGGGGTGAGAGGGTCCGTTGGG
Internal bar code:CCTCAGATGTGGTGGCAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCCCTTGAACCAACCC
Suggested primer 2:GTCGCTCATGGACTACCTGG