Gene: Cre11.g468356

Overview

Common name:TPR7,TPR
Defline:(1 of 1) K09291 - nucleoprotein TPR (TPR, MLP1, MLP2); Tetratricopeptide-repeat protein 7
Description:TPR domain containing protein; Identified as TPR as part of the nuclear pore complex
Synonyms:TPR,g11752.t2
Chromosome:chromosome 11

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.013579_3 CLIP2.013579 intron 40 6.1
CLIP2.023180_1 CLIP2.023180 intron 80 6.1
CLIP2.041057_1 CLIP2.041057 intron 80 6.1
CLIP2.041057_2 CLIP2.041057 intron 80 6.1
CLIP2.055010_3 CLIP2.055010 intron 80 6.1
CLIP2.068294_1 CLIP2.068294 intron 63 6.1
CLIP2.068503_1 CLIP2.068503 intron 40 6.1
CLIP2.074803_2 CLIP2.074803 intron 40 6.1
CLIP2.079383_3 CLIP2.079383 intron 63 6.1
LMJ.RY0402.061843_1 LMJ.RY0402.061843 intron 73 5.5
LMJ.RY0402.082938_1 LMJ.RY0402.082938 CDS 73 5.5
LMJ.RY0402.126366_1 LMJ.RY0402.126366 3'UTR 95 5.5
LMJ.RY0402.126366_2 LMJ.RY0402.126366 3'UTR 95 5.5
LMJ.RY0402.145153_1 LMJ.RY0402.145153 intron 95 5.5
LMJ.RY0402.145153_2 LMJ.RY0402.145153 intron 95 5.5
LMJ.RY0402.154533_1 LMJ.RY0402.154533 3'UTR 95 5.5
LMJ.RY0402.154533_2 LMJ.RY0402.154533 3'UTR 95 5.5
LMJ.RY0402.190636_1 LMJ.RY0402.190636 intron 73 5.5
LMJ.RY0402.191116_1 LMJ.RY0402.191116 3'UTR 58 5.5
LMJ.RY0402.198042_1 LMJ.RY0402.198042 3'UTR 58 5.5
LMJ.RY0402.228337_1 LMJ.RY0402.228337 3'UTR 73 5.5
LMJ.RY0402.246997_1 LMJ.RY0402.246997 3'UTR 73 5.5
LMJ.RY0402.254955_1 LMJ.RY0402.254955 intron 73 5.5

Gene Annotations

PFAM:PF07926
PANTHER: PTHR18898 PTHR18898:SF2
KEGG_ec:
KEGG_orthology:K09291
KOG:KOG4674
Gene ontology terms::GO:0006606
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Limited growth in liquid media, screen 4 of 4 ( 73% confidence (FDR = 0.27))
Photosynthesis or light sensitivity, screen 11 of 12 ( 97% confidence (FDR = 0.03))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.