Insertion junction: CLIP2.055010_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055010
Chromosome:chromosome 11
Location:1665240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468356 TPR7,TPR (1 of 1) K09291 - nucleoprotein TPR (TPR, MLP1, MLP2); Tetratricopeptide-repeat protein 7 intron
Cre11.g801272 (1 of 3) PTHR15535//PTHR15535:SF23 - TRANSMEMBRANE PROTEIN 2-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAAGGTATCGGCATCGAGGATAACGCGTTGGAGGCGGCGGAACTGACC
Internal bar code:GTGCATAGTCGTCTTAATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2038
LEAP-Seq percent confirming:30.2326
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTAGTGTCACCGTCAGCC
Suggested primer 2:GCCGTGCAAGAAGTAGACCT