Insertion junction: CLIP2.013612_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013612
Chromosome:chromosome 3
Location:6500409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193800 TSN1 Aspartyl-tRNA synthetase; (1 of 1) 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCGCTGCGGTGCGGGCCTGGAGGCGGGGAACAAGGAAACGGGGAGT
Internal bar code:TTAAGGAAAGCCCCGATACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:751
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGTATAGGTGCGGCTG
Suggested primer 2:ACAAGGAGGACAAGTCGCTG