Insertion junction: CLIP2.013612_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013612
Chromosome:chromosome 3
Location:6500413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193800 TSN1 Aspartyl-tRNA synthetase; (1 of 1) 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCACACGCACACACCTGCAGCTGGCCGGACACGGTGAGGAAGGCGGG
Internal bar code:TTAAGGAAAGCCCCGATACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2303
LEAP-Seq percent confirming:45.0704
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGAGGACAAGTCGCTG
Suggested primer 2:ATGACGTATAGGTGCGGCTG