Insertion junction: CLIP2.013703_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013703
Chromosome:chromosome 17
Location:2948103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACACCTGCTGCTGCTGCTGATGCCGCTGCTGGCCCCGCCCTGGACCT
Internal bar code:GTATGTAGTTGTTACCTCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGTCGCATTTGTCCGGA
Suggested primer 2:CTGTGGTGTTTTTGAGGCCG