Insertion junction: CLIP2.013770_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013770
Chromosome:chromosome 13
Location:1956189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576300 GSC1,APH1 (1 of 1) K06172 - anterior pharynx defective 1 (APH1); Gamma-secretase accessory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGAGCTGAGCTGAGCTGTGCTGAGCTGCGAGACAGGGCAGCCCCGTC
Internal bar code:TGGGCCCACGCTTTTATGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3449
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTATGCGCAACCCGTAGT
Suggested primer 2:CACCCACTCTCCAACCATCC