| Common name: | GSC1,APH1 |
| Defline: | (1 of 1) K06172 - anterior pharynx defective 1 (APH1); Gamma-secretase accessory subunit |
| Description: | homologous to anterior-pharynx-defective; forms the gamma-secretase complex with presenilin, nicastrin and pen-2; involved in regulated intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch |
| Synonyms: | g14162.t1,APH1,GSC1,Cre13.g576300.t1.1 |
| Chromosome: | chromosome 13 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013770_1 | CLIP2.013770 | intron | 80 | 6.1 |
| CLIP2.023636_1 | CLIP2.023636 | intron | 80 | 6.1 |
| CLIP2.023636_2 | CLIP2.023636 | intron | 80 | 6.1 |
| CLIP2.027603_1 | CLIP2.027603 | CDS | 80 | 6.1 |
| CLIP2.045026_1 | CLIP2.045026 | intron | 80 | 6.1 |
| CLIP2.047256_2 | CLIP2.047256 | intron | 80 | 6.1 |
| CLIP2.047256_3 | CLIP2.047256 | intron | 80 | 6.1 |
| CLIP2.048112_1 | CLIP2.048112 | CDS | 80 | 6.1 |
| CLIP2.049264_1 | CLIP2.049264 | intron | 80 | 6.1 |
| CLIP2.050534_1 | CLIP2.050534 | intron | 80 | 6.1 |
| LMJ.RY0402.089836_2 | LMJ.RY0402.089836 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.123980_1 | LMJ.RY0402.123980 | intron | 73 | 5.5 |
| LMJ.RY0402.152088_1 | LMJ.RY0402.152088 | intron | 95 | 5.5 |
| LMJ.RY0402.152088_2 | LMJ.RY0402.152088 | intron | 95 | 5.5 |
| PFAM: | PF06105 |
| PANTHER: | PTHR12889 PTHR12889:SF0 |
| KEGG_ec: | |
| KEGG_orthology: | K06172 |
| KOG: | KOG3972 |
| Gene ontology terms:: | GO:0016021, GO:0016485, GO:0043085 |
| Best arabidopsis TAIR name: | AT2G31440 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 1) PTHR12889 - GAMMA-SECRETASE SUBUNIT APH-1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.