Insertion junction: CLIP2.047256_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047256
Chromosome:chromosome 13
Location:1955280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576300 GSC1,APH1 (1 of 1) K06172 - anterior pharynx defective 1 (APH1); Gamma-secretase accessory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACAGGTGACGGCACGCTGTATGTGGCGGAGTGCCCGCAGATGTCCGT
Internal bar code:TTTGTGGCTTATCCGTTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAAGCGAGGTCAGGATC
Suggested primer 2:TCTTCTTCCTGTCGCTGCTG