Insertion junction: CLIP2.013893_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013893
Chromosome:chromosome 3
Location:4639285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176930 (1 of 4) PF03134 - TB2/DP1, HVA22 family (TB2_DP1_HVA22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCCCCCCTCGTTCCCGGCCCCGCCGCGGCTGGAAGGAACCGGAGG
Internal bar code:AGTTTACAAACAGTGTGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1160
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGGTTGACCTTAACGGA
Suggested primer 2:GGGTCGGTGTTGAGAGTGAG