Insertion junction: CLIP2.014001_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014001
Chromosome:chromosome 16
Location:2801505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662500 (1 of 1) PTHR12197//PTHR12197:SF138//PTHR13078 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAACGCGACAGGCAGGAGGAACACGGCGCGCCCGAGGCGCCACAAGG
Internal bar code:CGGGACTGTACTTAGTAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAATGTCAACAGGGGA
Suggested primer 2:CGAAGGAACATGTTAGCGCG