Insertion junction: CLIP2.014001_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014001
Chromosome:chromosome 16
Location:2801505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662500 (1 of 1) PTHR12197//PTHR12197:SF138//PTHR13078 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTTGCGCCATAACCTGTACTGTGCTAACTTTGGGCCCACCCTCCCCA
Internal bar code:GGCGGCCCCAGGGATGTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2391
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:GGCTGAATGTCAACAGGGGA