Insertion junction: CLIP2.014184_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014184
Chromosome:chromosome 6
Location:2712397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270850 SRH12 (1 of 1) K10841 - DNA excision repair protein ERCC-6 (ERCC6, CSB, RAD26); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCAGGTAGGGCGCGATGAGGTCGCGCAGCACCACGGCGCACTTATA
Internal bar code:AACCCGAGATTTGTACCTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGCCTGTTCGACTTCA
Suggested primer 2:GTATCTGGGGGAGGGTCACT