Insertion junction: CLIP2.014279_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014279
Chromosome:chromosome 2
Location:1636717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085257 COP4,CHR2,CSOB Channelrhodopsin 2; (1 of 1) IPR001425//IPR029730 - Archaeal/bacterial/fungal rhodopsin // Archaeal/bacterial/fungal rhodopsin-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTGCCACCAATGTTCAATTTGGTGGTCTTGCGAATGTCGCCGTGGA
Internal bar code:TTAAGCCTGACATAAGCTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5506
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:238
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:238

Suggested primers for confirmation by PCR

Suggested primer 1:GGATACCGTAGAAGGCCACG
Suggested primer 2:CGTTCATGCCGTTCATTCCC