Insertion junction: CLIP2.014279_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014279
Chromosome:chromosome 2
Location:1636719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085257 COP4,CHR2,CSOB Channelrhodopsin 2; (1 of 1) IPR001425//IPR029730 - Archaeal/bacterial/fungal rhodopsin // Archaeal/bacterial/fungal rhodopsin-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTCGAGACGCTGGTGGAGGACGAGGCCGAGGCTGGCGCGGTCAACA
Internal bar code:AAGATCTTAGCGTTGTTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4987
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCATGCCGTTCATTCCC
Suggested primer 2:GGATACCGTAGAAGGCCACG