Insertion junction: CLIP2.014280_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014280
Chromosome:chromosome 1
Location:5252837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCGCTTTGGTCCGCTCCCTCCAGTGGTTCCAGCCCTGATCGGGC
Internal bar code:CATCGGGCTACGTACGGCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCGATTTGCCGCGAAG
Suggested primer 2:AGGAGCTCCTGCAGTACGTA