Gene: Cre01.g036850
Overview
| Common name: | PDY1 |
| Defline: | (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase |
| Description: | Contains a proline dehydrogenase domain (IPR2872) and a potential EF-hand. An EF-hand is also present in a Caenorhabditis elegans proline oxidase. In human, a proline oxidase gene is induced by p53 (PIG6) and mediates apoptosis through a calcineurin-dependent pathway [PMID: 15914462]. In Arabidopsis a proline oxidase gene is induced in response to osmotic stress [PMID:8776899]. |
| Synonyms: | PDY1,g827.t1,Cre01.g036850.t1.1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g036850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g036850-Venus-3xFLAG
Imaged strain: CSI_LW06G10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
mitochondria
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013463_1 | CLIP2.013463 | CDS | 80 | 6.1 |
| CLIP2.013463_2 | CLIP2.013463 | CDS | 80 | 6.1 |
| CLIP2.014280_1 | CLIP2.014280 | intron | 80 | 6.1 |
| CLIP2.014280_2 | CLIP2.014280 | intron | 80 | 6.1 |
| CLIP2.032546_1 | CLIP2.032546 | intron | 80 | 6.1 |
| CLIP2.032546_2 | CLIP2.032546 | intron | 80 | 6.1 |
| CLIP2.044562_1 | CLIP2.044562 | intron | 80 | 6.1 |
| CLIP2.044562_2 | CLIP2.044562 | intron | 80 | 6.1 |
| CLIP2.050354_1 | CLIP2.050354 | intron | 80 | 6.1 |
| CLIP2.050354_2 | CLIP2.050354 | intron | 80 | 6.1 |
| LMJ.RY0402.058681_1 | LMJ.RY0402.058681 | intron | 73 | 5.5 |
| LMJ.RY0402.113384_1 | LMJ.RY0402.113384 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.113384_2 | LMJ.RY0402.113384 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.149356_1 | LMJ.RY0402.149356 | intron | 73 | 5.5 |
| LMJ.RY0402.169655_1 | LMJ.RY0402.169655 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.241986_1 | LMJ.RY0402.241986 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01619 |
| PANTHER: | PTHR13914 PTHR13914:SF0 |
| KEGG_ec: | EC:1.5.5.2 |
| KEGG_orthology: | K00318 |
| KOG: | KOG0186 |
| Gene ontology terms:: | GO:0004657, GO:0005509, GO:0006562 |
| Best arabidopsis TAIR name: | AT3G30775 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Methylenetetrahydrofolate reductase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.