Insertion junction: CLIP2.032546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032546
Chromosome:chromosome 1
Location:5253274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGTGTGTGATGCAGAGCTCTTGGGCTTAGCCACGGCGCACGTAGCCC
Internal bar code:GGGTTGTCAACCGTTTGTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3666
LEAP-Seq percent confirming:86.0465
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGACCACCAAGCGATCTT
Suggested primer 2:AGGAGCTCCTGCAGTACGTA