Insertion junction: LMJ.RY0402.241986_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.241986
Chromosome:chromosome 1
Location:5271406
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTAGTCGAATTATTTACACACTCACGT
Internal bar code:TCTCGGAGCCAGGCTGAACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:98.0237
LEAP-Seq n confirming:248
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACACACTTGCAGTGGAC
Suggested primer 2:ACTCTGGAGCAAGGTCTGGA