Insertion junction: CLIP2.044562_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044562
Chromosome:chromosome 1
Location:5253932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTACCCAAACGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:TCTTGTCACATAAGTGATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1751
LEAP-Seq percent confirming:85.3659
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGTCAATCATCAGCTTG
Suggested primer 2:CCCAAGAGCTCTGCATCACA