Insertion junction: LMJ.RY0402.058681_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.058681
Chromosome:chromosome 1
Location:5271478
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGGCACAAGCGACGTGGGCAGTGACC
Internal bar code:CAGTCAGGTTCGGCCTGGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:99.3232
LEAP-Seq n confirming:3082
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCTGGAGCAAGGTCTGGA
Suggested primer 2:AGCACACACTTGCAGTGGAC