Insertion junction: LMJ.RY0402.169655_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.169655
Chromosome:chromosome 1
Location:5276284
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g036850 PDY1 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTACGGCACTCCAGCGCTGCTGCCACGA
Internal bar code:ACTAAGTTGATCCCCGGCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:96.8346
LEAP-Seq n confirming:1499
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACGAAGGTCCCGTTAG
Suggested primer 2:TAACGAGGCGCAGTACACAC