Insertion junction: CLIP2.014666_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014666
Chromosome:chromosome 1
Location:5650882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040379 (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGGGTACTGGCGGGGCGGGGCGGGGCGGGGCTACCTCGGCGGTATG
Internal bar code:GGGTGATAGACAATTAAAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCATCCCCATCCCCAT
Suggested primer 2:CGATGAAGAGGACGAGGACG