| Common name: | |
| Defline: | (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) |
| Description: | |
| Synonyms: | Cre01.g040379.t1.1,g901.t1 |
| Chromosome: | chromosome 1 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.010420_1 | CLIP2.010420 | intron | 80 | 6.1 |
| CLIP2.010420_2 | CLIP2.010420 | intron | 80 | 6.1 |
| CLIP2.014666_1 | CLIP2.014666 | CDS/intron | 80 | 6.1 |
| CLIP2.014666_2 | CLIP2.014666 | CDS/intron | 80 | 6.1 |
| CLIP2.027047_1 | CLIP2.027047 | intron | 63 | 6.1 |
| CLIP2.028106_1 | CLIP2.028106 | intron | 80 | 6.1 |
| CLIP2.028106_2 | CLIP2.028106 | intron | 80 | 6.1 |
| CLIP2.045144_1 | CLIP2.045144 | intron | 80 | 6.1 |
| CLIP2.045144_2 | CLIP2.045144 | intron | 80 | 6.1 |
| CLIP2.051469_1 | CLIP2.051469 | CDS | 80 | 6.1 |
| CLIP2.051469_2 | CLIP2.051469 | CDS | 80 | 6.1 |
| LMJ.RY0402.042186_1 | LMJ.RY0402.042186 | CDS | 73 | 5.5 |
| LMJ.RY0402.042186_2 | LMJ.RY0402.042186 | CDS | 73 | 5.5 |
| LMJ.RY0402.070257_1 | LMJ.RY0402.070257 | intron | 58 | 5.5 |
| LMJ.RY0402.080899_1 | LMJ.RY0402.080899 | intron | 73 | 5.5 |
| LMJ.RY0402.125221_1 | LMJ.RY0402.125221 | intron | 73 | 5.5 |
| LMJ.RY0402.185016_1 | LMJ.RY0402.185016 | CDS | 95 | 5.5 |
| LMJ.RY0402.185016_2 | LMJ.RY0402.185016 | CDS | 95 | 5.5 |
| LMJ.SG0182.019604_1 | LMJ.SG0182.019604 | CDS | 75 | 5.3 |
| PFAM: | PF13245 |
| PANTHER: | PTHR10887 |
| KEGG_ec: | EC:3.6.4.12 EC:3.6.4.13 |
| KEGG_orthology: | K14326 |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G47010.1 |
| Best arabidopsis TAIR symbol: | ATUPF1,LBA1,UPF1 |
| Best arabidopsis TAIR defline: | RNA helicase, putative |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.