| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | + |
| Strain: | CLIP2.028106 |
| Chromosome: | chromosome 1 |
| Location: | 5652622 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre01.g040379 | (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) | intron |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CGAACGCATCCCGTACAGCCCCCAGCCCGGTAACCGGACGTTCGCTCCCC |
| Internal bar code: | TAGCTAGGTAAGCGCCCTGACG |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 69 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 3 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 3 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | AAGTCCGTGCGATCAACACT |
| Suggested primer 2: | GCGTGCGTTGTTGTGTTTTG |