Insertion junction: CLIP2.014929_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014929
Chromosome:chromosome 6
Location:3005739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274350 HTR5,HTR29 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGACCGACCTGCGCTTCCAGAGCCAGGCCGTGCTGGCGCTGCAGGAG
Internal bar code:GGTCGACCCGAGAATAAGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGTGGACGCATCAGGA
Suggested primer 2:CTTGGTGATGCCCTGGATGT