Insertion junction: CLIP2.015116_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015116
Chromosome:chromosome 10
Location:3127438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441650 (1 of 1) PF06650//PF16908 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGAGCTGGGCCAGAGCCATTTCCCGCAAGTGGGCCAGGAGCCGGTG
Internal bar code:CTGTGTCTTTGCGGTATAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCAAATCAAACACACGT
Suggested primer 2:CCTATTGCGCCAATGCACTC