Insertion junction: CLIP2.015246_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015246
Chromosome:chromosome 9
Location:6374304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414416 CYCD4 D-type cyclin; (1 of 1) IPR006671//IPR013763//IPR027417 - Cyclin, N-terminal // Cyclin-like // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCAAGTGTGCGGGCATGCCAGGTACCGGGGCACGTACGCCTAGTACG
Internal bar code:TACCAAAGCAGAGAGTCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1700
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCGTGGGGTGGATTGAT
Suggested primer 2:GCGGTTGGGTTGGTTAACAC