Insertion junction: CLIP2.015347_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015347
Chromosome:chromosome 6
Location:3338801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277801 DNL4,DNL7 DNA ligase; (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGCCACCCCCCCCCCCACACACACACACACCGCGTCGCATGCATG
Internal bar code:ATGGGGGAATTACCTAGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:556
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTAGCGAGCACAAGGA
Suggested primer 2:TTCCATACCAGCATCTCGCC