Gene: Cre06.g277801

Overview

Common name:	DNL4,DNL7
Defline:	DNA ligase; (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4)
Description:	ATP dependent DNA ligase, similar to DNL4, possibly also involved in non-homologous end joining (NHEJ); null-allele mutant was isolated (PMID 29743196)
Synonyms:	g6225.t1,DNL4,Cre06.g277800.t1.3
Chromosome:	chromosome 6

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.015162_1	CLIP2.015162	intron	80	6.1
CLIP2.015162_2	CLIP2.015162	intron	80	6.1
CLIP2.015347_1	CLIP2.015347	intron	80	6.1
CLIP2.015347_2	CLIP2.015347	intron	80	6.1
CLIP2.018184_3	CLIP2.018184	intron	63	6.1
CLIP2.025889_1	CLIP2.025889	intron	80	6.1
CLIP2.025889_2	CLIP2.025889	intron	80	6.1
CLIP2.026312_1	CLIP2.026312	intron	80	6.1
CLIP2.026312_2	CLIP2.026312	intron	80	6.1
CLIP2.040712_1	CLIP2.040712	intron	80	6.1
CLIP2.040712_2	CLIP2.040712	intron	80	6.1
CLIP2.064295_1	CLIP2.064295	3'UTR	80	6.1
CLIP2.064295_2	CLIP2.064295	3'UTR	80	6.1
LMJ.RY0402.044640_1	LMJ.RY0402.044640	intron	73	5.5
LMJ.RY0402.051465_1	LMJ.RY0402.051465	intron	95	5.5
LMJ.RY0402.051465_2	LMJ.RY0402.051465	intron	95	5.5
LMJ.RY0402.060263_1	LMJ.RY0402.060263	intron	95	5.5
LMJ.RY0402.060263_2	LMJ.RY0402.060263	intron	95	5.5
LMJ.RY0402.072808_1	LMJ.RY0402.072808	intron	58	5.5
LMJ.RY0402.075857_1	LMJ.RY0402.075857	intron	95	5.5
LMJ.RY0402.075857_2	LMJ.RY0402.075857	intron	95	5.5
LMJ.RY0402.099660_1	LMJ.RY0402.099660	intron	73	5.5
LMJ.RY0402.123316_1	LMJ.RY0402.123316	intron	73	5.5
LMJ.RY0402.133813_1	LMJ.RY0402.133813	CDS	73	5.5
LMJ.RY0402.165655_1	LMJ.RY0402.165655	intron	95	5.5
LMJ.RY0402.165655_2	LMJ.RY0402.165655	intron	95	5.5
LMJ.RY0402.167472_1	LMJ.RY0402.167472	intron	95	5.5
LMJ.RY0402.167472_2	LMJ.RY0402.167472	intron	95	5.5
LMJ.RY0402.200099_1	LMJ.RY0402.200099	intron	95	5.5
LMJ.RY0402.200099_2	LMJ.RY0402.200099	intron	95	5.5
LMJ.RY0402.213018_1	LMJ.RY0402.213018	intron	73	5.5
LMJ.RY0402.214095_1	LMJ.RY0402.214095	intron	58	5.5

Gene Annotations

PFAM:	PF01068, PF04675
PANTHER:	PTHR10459 PTHR10459:SF71
KEGG_ec:	EC:6.5.1.1
KEGG_orthology:	K10777
KOG:
Gene ontology terms::	GO:0003677, GO:0003910, GO:0005524, GO:0006281, GO:0006310
Best arabidopsis TAIR name:	AT5G57160.1
Best arabidopsis TAIR symbol:	ATLIG4,LIG4
Best arabidopsis TAIR defline:	DNA ligase IV
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.