Insertion junction: CLIP2.026312_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026312
Chromosome:chromosome 6
Location:3338504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277801 DNL4,DNL7 DNA ligase; (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGTCTTCCTTACCTACCATCTCAACTGTCTCAACCCGCCAACCACCC
Internal bar code:GTTCCATCTCTTGCCTGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCGTACACACAAACAC
Suggested primer 2:GGGTGGAGGCGATATGTGTT