Insertion junction: CLIP2.064295_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064295
Chromosome:chromosome 6
Location:3351381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277801 DNL4,DNL7 DNA ligase; (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) 3'UTR
Cre06.g800655 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTTGATTCGCGCTCCAGGCTGCCCCGGGTTTTTTAGGGCTTCGCCAG
Internal bar code:ATTAGGACGGAATTGTACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3930
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGAGCGGCCCTTAAGA
Suggested primer 2:TGGGATGTTGTGTTAGCGCT