Insertion junction: CLIP2.015347_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015347
Chromosome:chromosome 6
Location:3338805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277801 DNL4,DNL7 DNA ligase; (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGTTCGTGTATCCGGACAACCCGTAGTTGCTGATGCCAGGGTGTGT
Internal bar code:TTTAGGCTAAGAGGTCGGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATACCAGCATCTCGCC
Suggested primer 2:TGCATTAGCGAGCACAAGGA