Insertion junction: CLIP2.015413_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015413
Chromosome:chromosome 10
Location:1443481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428100 TMG5 (1 of 1) PTHR10631//PTHR10631:SF2 - N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE // N2, N2-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASES-LIKE PROTEIN; possible N2,N2-dimethylguanosine tRNA methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTGCTTACCCTCCCAGCCGGCGGCGCGTTCTACCGGGCTGAGAGCT
Internal bar code:GATATGTGTCTTATTTAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3186
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCTTCATGCAAGTCGGA
Suggested primer 2:AGCCCAGAGGAATTGCAGTC