Insertion junction: CLIP2.015621_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015621
Chromosome:chromosome 11
Location:1983227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467772 CYCD1 D-type cyclin; (1 of 10) PTHR10177 - CYCLINE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAAGGCGGCAACACCAGCCCGCCCTATCGCCCGCCCTTTCGCCCGCC
Internal bar code:AGAAAGTCACGGCCGGGATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTTGAAACTCGCCCGCA
Suggested primer 2:GAATGACTGCTTCCTGGGCT