Insertion junction: CLIP2.015701_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015701
Chromosome:chromosome 3
Location:5329707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182950 (1 of 1) K12820 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 (DHX15, PRP43) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACTATTATCTACAACCACCCACACAACCTCCTCCATTCCACCTCCG
Internal bar code:AAGTTTTGACTTGCCGCTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACATGCAGCACAAGCAA
Suggested primer 2:CGGGATAATGCAACGCTTGG