| Common name: | |
| Defline: | (1 of 1) K12820 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 (DHX15, PRP43) |
| Description: | DEAH-box helicase, possibly nuclear pre-mRNA splicing factor. Homologue of S. cerevisiae mRNA splicing helicases Prp2, Prp16, Prp22 and Prp43 which are required at different steps of the spliceosome cycle. Previously annotated as SPLH2 |
| Synonyms: | Cre03.g182950.t1.1,g3792.t1 |
| Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.015701_1 | CLIP2.015701 | intron | 80 | 6.1 |
| CLIP2.015701_2 | CLIP2.015701 | intron | 80 | 6.1 |
| CLIP2.050545_3 | CLIP2.050545 | intron | 63 | 6.1 |
| CLIP2.060015_1 | CLIP2.060015 | 5'UTR | 80 | 6.1 |
| CLIP2.060015_2 | CLIP2.060015 | 5'UTR | 80 | 6.1 |
| CLIP2.074762_1 | CLIP2.074762 | 3'UTR | 80 | 6.1 |
| CLIP2.074966_1 | CLIP2.074966 | 3'UTR | 80 | 6.1 |
| CLIP2.074966_2 | CLIP2.074966 | 3'UTR | 80 | 6.1 |
| CLIP2.078755_1 | CLIP2.078755 | 3'UTR | 80 | 6.1 |
| CLIP2.078755_2 | CLIP2.078755 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.057919_1 | LMJ.RY0402.057919 | intron | 73 | 5.5 |
| LMJ.RY0402.060962_1 | LMJ.RY0402.060962 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.088663_1 | LMJ.RY0402.088663 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.088663_2 | LMJ.RY0402.088663 | 3'UTR | 95 | 5.5 |
| PFAM: | PF00271, PF04408, PF07717, PF13401 |
| PANTHER: | PTHR18934 |
| KEGG_ec: | EC:3.6.4.13 |
| KEGG_orthology: | K12820 |
| KOG: | KOG0925 |
| Gene ontology terms:: | GO:0004386 |
| Best arabidopsis TAIR name: | AT3G62310 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | RNA helicase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.