Insertion junction: CLIP2.015754_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015754
Chromosome:chromosome 16
Location:2685301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661650 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGGGGCAGTGTCTCTGCTACTCACCACACGAGCGCCGCTCCTCCAC
Internal bar code:GAACTATCATAGCGTTTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGCATACCTTGACACA
Suggested primer 2:GGCACGCCTATCTACGCATA