Gene: Cre16.g661650

Overview

Common name:
Defline:(1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain
Description:
Synonyms:g15978.t1
Chromosome:chromosome 16

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.015754_1 CLIP2.015754 intron 80 6.1
CLIP2.015754_2 CLIP2.015754 intron 80 6.1
CLIP2.015846_1 CLIP2.015846 CDS 80 6.1
CLIP2.015846_2 CLIP2.015846 CDS 80 6.1
CLIP2.019244_1 CLIP2.019244 CDS 80 6.1
CLIP2.019244_2 CLIP2.019244 CDS 80 6.1
CLIP2.023267_1 CLIP2.023267 intron 80 6.1
CLIP2.023267_2 CLIP2.023267 intron 80 6.1
CLIP2.023799_3 CLIP2.023799 intron 80 6.1
CLIP2.023799_4 CLIP2.023799 intron 80 6.1
CLIP2.039988_1 CLIP2.039988 CDS 80 6.1
CLIP2.039988_2 CLIP2.039988 CDS 80 6.1
CLIP2.057638_1 CLIP2.057638 3'UTR 80 6.1
CLIP2.057638_2 CLIP2.057638 3'UTR 80 6.1
LMJ.RY0402.081792_1 LMJ.RY0402.081792 3'UTR 58 5.5
LMJ.RY0402.108272_1 LMJ.RY0402.108272 CDS 58 5.5
LMJ.RY0402.116458_1 LMJ.RY0402.116458 CDS 73 5.5
LMJ.RY0402.140281_2 LMJ.RY0402.140281 3'UTR 73 5.5
LMJ.RY0402.145727_1 LMJ.RY0402.145727 intron 73 5.5
LMJ.RY0402.148373_1 LMJ.RY0402.148373 intron 73 5.5
LMJ.RY0402.148450_1 LMJ.RY0402.148450 CDS 73 5.5
LMJ.RY0402.149360_1 LMJ.RY0402.149360 3'UTR 73 5.5
LMJ.RY0402.151456_1 LMJ.RY0402.151456 3'UTR 73 5.5
LMJ.RY0402.179534_1 LMJ.RY0402.179534 intron 95 5.5
LMJ.RY0402.179534_2 LMJ.RY0402.179534 intron 95 5.5
LMJ.RY0402.204124_1 LMJ.RY0402.204124 CDS 73 5.5
LMJ.RY0402.210927_1 LMJ.RY0402.210927 3'UTR 58 5.5

Gene Annotations

PFAM:PF00847
PANTHER: PTHR31190 PTHR31190:SF1
KEGG_ec:
KEGG_orthology:K09286
KOG:
Gene ontology terms::GO:0003677, GO:0003700, GO:0006355
Best arabidopsis TAIR name:AT5G18560.1
Best arabidopsis TAIR symbol:PUCHI
Best arabidopsis TAIR defline:Integrase-type DNA-binding superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT027E04, screen 1 of 1 ( 79% confidence (FDR = 0.21))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.