Insertion junction: LMJ.RY0402.149360_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.149360
Chromosome:chromosome 16
Location:2601296
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g661650 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTTTTTCTTGTCGCACCCTGCAACCAC
Internal bar code:GGAGATTGTCGCAATAGTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:436
LEAP-Seq percent confirming:99.6942
LEAP-Seq n confirming:8151
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGACGGGTGACGGTAG
Suggested primer 2:CTAACGTTTGGGAAGCGAAG