Insertion junction: CLIP2.057638_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057638
Chromosome:chromosome 16
Location:2682034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661650 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACTCAGCGTGTCAAACCCGGTCCTGCATGGGAGCCGCTACAGGCCCA
Internal bar code:GTGTGAGTATAGATTTTGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2533
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTTGCCATGCTATGCT
Suggested primer 2:CGAAGACTTGGGGCACTGAT