Insertion junction: CLIP2.023267_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023267
Chromosome:chromosome 16
Location:2687578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661650 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGACGAGGGTCGACGTTTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:AGTGTATATGAACGAAATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3504
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGCTGTGGACAGGGGAG
Suggested primer 2:GCTTCTCTATGCGTGCTTGC