Insertion junction: CLIP2.019244_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019244
Chromosome:chromosome 16
Location:2685002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661650 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGGGTGGCGGCTACCCGCCGTACGACCCGTACGGCTACTACGGCCC
Internal bar code:CGACATGAAAAGGTTTTCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2379
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCAGGGTCGTACAGGC
Suggested primer 2:AGGGTGCATGATTGTGGGAG