Insertion junction: CLIP2.016103_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016103
Chromosome:chromosome 3
Location:8679452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209281 (1 of 1) IPR000547//IPR001680//IPR011990//IPR015943//IPR017986 - Clathrin, heavy chain/VPS, 7-fold repeat // WD40 repeat // Tetratricopeptide-like helical domain // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGGATTGTATTGTACATTACCATCCCCCTATTCCCCCAAAGTCGTC
Internal bar code:ATAACAACAAAGTCCTAGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGTCTACCACTTCCCTA
Suggested primer 2:ATATGCCCAAGCCCAACGAA