Insertion junction: CLIP2.016142_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016142
Chromosome:chromosome 13
Location:2174954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577950 VPS60 Subunit of the ESCRT-III complex; (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAGACGCGGCCAGGGCCGGCGCAAGATGCCATCAAGCGGCGAGCGC
Internal bar code:CCGATTTCCAAAATACATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGCTCCAGGTTGAACT
Suggested primer 2:GTCGCTCCTCAAACCCAGAA