Gene: Cre13.g577950 (Genome version: v5.5)

Overview

Common name:VPS60
Defline:Subunit of the ESCRT-III complex
Description:Expressed Protein. Similar to VPS60, a SNF7-domain protein, component of the ESCRT-III complex involved in the ubiquitin-mediated internalization into the multi-vesicular bodies (late endosomes)
Synonyms:g14200.t1,Cre13.g577950.t1.1,VPS60
Chromosome:chromosome_13

Insertions

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.052577_1 LMJ.RY0402.052577 sense 5'UTR 95
LMJ.RY0402.052577_2 LMJ.RY0402.052577 sense 5'UTR 95
LMJ.RY0402.063068_1 LMJ.RY0402.063068 antisense 3'UTR 95
LMJ.RY0402.063068_2 LMJ.RY0402.063068 sense 3'UTR 95
LMJ.RY0402.120047_1 LMJ.RY0402.120047 antisense intron 73
LMJ.RY0402.120047_2 LMJ.RY0402.120047 sense intron 73
LMJ.RY0402.129258_1 LMJ.RY0402.129258 sense CDS 95
LMJ.RY0402.129258_2 LMJ.RY0402.129258 antisense CDS 95
LMJ.RY0402.134718_2 LMJ.RY0402.134718 antisense 5'UTR 95
LMJ.RY0402.147192_1 LMJ.RY0402.147192 sense intron 73
LMJ.RY0402.152421_1 LMJ.RY0402.152421 antisense intron 95
LMJ.RY0402.152421_2 LMJ.RY0402.152421 antisense intron 95
LMJ.RY0402.160721_1 LMJ.RY0402.160721 antisense intron 95
LMJ.RY0402.160721_2 LMJ.RY0402.160721 antisense CDS 95
LMJ.RY0402.176819_1 LMJ.RY0402.176819 antisense 5'UTR 95
LMJ.RY0402.176819_2 LMJ.RY0402.176819 antisense 5'UTR 95
LMJ.RY0402.231268_1 LMJ.RY0402.231268 antisense intron 95
LMJ.RY0402.231268_2 LMJ.RY0402.231268 antisense intron 95
LMJ.RY0402.238111_1 LMJ.RY0402.238111 sense intron 73
LMJ.RY0402.242861_1 LMJ.RY0402.242861 sense intron 73
LMJ.RY0402.243894_3 LMJ.RY0402.243894 antisense 5'UTR 73
LMJ.RY0402.245611_1 LMJ.RY0402.245611 antisense intron 73
LMJ.RY0402.245611_2 LMJ.RY0402.245611 antisense intron 73
LMJ.RY0402.247514_1 LMJ.RY0402.247514 sense intron 95
LMJ.RY0402.247514_2 LMJ.RY0402.247514 sense intron 95
LMJ.RY0402.250543_3 LMJ.RY0402.250543 sense intron 73

Gene Annotations

PFAM:PF03357
PANTHER: PTHR14048:SF4 PTHR14048
KEGG_ec:
KEGG_orthology:K12198
KOG:KOG1655
Gene ontology terms::GO:0015031
Best arabidopsis TAIR name:AT3G10640.1
Best arabidopsis TAIR symbol:VPS60.1
Best arabidopsis TAIR defline:SNF7 family protein

Phytozome Locus Page