Insertion junction: CLIP2.032380_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032380
Chromosome:chromosome 13
Location:2174954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577950 VPS60 Subunit of the ESCRT-III complex; (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAGACGCGGCCAGGGCCGGCGCAAGATGCCATCAAGCGGCGAGCGC
Internal bar code:GGTATGTTGTAATATGATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGCTCCAGGTTGAACT
Suggested primer 2:GTCGCTCCTCAAACCCAGAA