Insertion junction: CLIP2.043656_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043656
Chromosome:chromosome 13
Location:2174948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577950 VPS60 Subunit of the ESCRT-III complex; (1 of 1) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGTACTTCGCTAGCTGCTCATCCAGTGCGCGGATCTTTGCATCGGC
Internal bar code:CAGTCATTCAGTGGCGGCTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCTCCTCAAACCCAGAA
Suggested primer 2:CGTCTGCTCCAGGTTGAACT